TY - JOUR
T1 - High-resolution magic-angle-spinning NMR spectroscopy for metabolic profiling of intact tissues
AU - Beckonert, Olaf
AU - Coen, Muireann
AU - Keun, Hector C.
AU - Wang, Yulan
AU - Ebbels, Timothy M.D.
AU - Holmes, Elaine
AU - Lindon, John C.
AU - Nicholson, Jeremy K.
PY - 2010/5/13
Y1 - 2010/5/13
N2 - Metabolic profiling, metabolomic and metabonomic studies require robust study protocols for any large-scale comparisons and evaluations. Detailed methods for solution-state nMrspectroscopy have been summarized in an earlier protocol. this protocol details the analysis of intact tissue samples by means of high-resolution magic-angle-spinning (Hr-Mas) nMrspectroscopy and we provide a detailed description of sample collection, preparation and analysis. Described here are 1 H nMrspectroscopic techniques such as the standard one-dimensional, relaxation-edited, diffusion-edited and two-dimensional J-resolved pulse experiments, as well as one-dimensional 31 p nMrspectroscopy. these are used to monitor different groups of metabolites, e.g., sugars, amino acids and osmolytes as well as larger molecules such as lipids, non-invasively. through the use of nMr-based diffusion coefficient and relaxation times measurements, information on molecular compartmentation and mobility can be gleaned. the nMrmethods are often combined with statistical analysis for further metabonomics analysis and biomarker identification. the standard acquisition time per sample is 8-10 min for a simple one-dimensional 1 H nMrspectrum, giving access to metabolite information while retaining tissue integrity and hence allowing direct comparison with histopathology and MrI/Mrs findings or the evaluation together with biofluid metabolic-profiling data.
AB - Metabolic profiling, metabolomic and metabonomic studies require robust study protocols for any large-scale comparisons and evaluations. Detailed methods for solution-state nMrspectroscopy have been summarized in an earlier protocol. this protocol details the analysis of intact tissue samples by means of high-resolution magic-angle-spinning (Hr-Mas) nMrspectroscopy and we provide a detailed description of sample collection, preparation and analysis. Described here are 1 H nMrspectroscopic techniques such as the standard one-dimensional, relaxation-edited, diffusion-edited and two-dimensional J-resolved pulse experiments, as well as one-dimensional 31 p nMrspectroscopy. these are used to monitor different groups of metabolites, e.g., sugars, amino acids and osmolytes as well as larger molecules such as lipids, non-invasively. through the use of nMr-based diffusion coefficient and relaxation times measurements, information on molecular compartmentation and mobility can be gleaned. the nMrmethods are often combined with statistical analysis for further metabonomics analysis and biomarker identification. the standard acquisition time per sample is 8-10 min for a simple one-dimensional 1 H nMrspectrum, giving access to metabolite information while retaining tissue integrity and hence allowing direct comparison with histopathology and MrI/Mrs findings or the evaluation together with biofluid metabolic-profiling data.
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U2 - 10.1038/nprot.2010.45
DO - 10.1038/nprot.2010.45
M3 - Article
C2 - 20539278
AN - SCOPUS:77956597651
SN - 1754-2189
VL - 5
SP - 1019
EP - 1032
JO - Nature Protocols
JF - Nature Protocols
IS - 6
ER -