High-resolution magic-angle-spinning NMR spectroscopy for metabolic profiling of intact tissues

Olaf Beckonert, Muireann Coen, Hector C. Keun, Yulan Wang, Timothy M.D. Ebbels, Elaine Holmes, John C. Lindon, Jeremy K. Nicholson*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

328 Citations (Scopus)

Abstract

Metabolic profiling, metabolomic and metabonomic studies require robust study protocols for any large-scale comparisons and evaluations. Detailed methods for solution-state nMrspectroscopy have been summarized in an earlier protocol. this protocol details the analysis of intact tissue samples by means of high-resolution magic-angle-spinning (Hr-Mas) nMrspectroscopy and we provide a detailed description of sample collection, preparation and analysis. Described here are 1 H nMrspectroscopic techniques such as the standard one-dimensional, relaxation-edited, diffusion-edited and two-dimensional J-resolved pulse experiments, as well as one-dimensional 31 p nMrspectroscopy. these are used to monitor different groups of metabolites, e.g., sugars, amino acids and osmolytes as well as larger molecules such as lipids, non-invasively. through the use of nMr-based diffusion coefficient and relaxation times measurements, information on molecular compartmentation and mobility can be gleaned. the nMrmethods are often combined with statistical analysis for further metabonomics analysis and biomarker identification. the standard acquisition time per sample is 8-10 min for a simple one-dimensional 1 H nMrspectrum, giving access to metabolite information while retaining tissue integrity and hence allowing direct comparison with histopathology and MrI/Mrs findings or the evaluation together with biofluid metabolic-profiling data.

Original languageEnglish
Pages (from-to)1019-1032
Number of pages14
JournalNature Protocols
Volume5
Issue number6
DOIs
Publication statusPublished - May 13 2010
Externally publishedYes

ASJC Scopus Subject Areas

  • General Biochemistry,Genetics and Molecular Biology

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